Answers for "get sample ids bcftools"

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bcftools extract information

# Example usage:
bcftools query --format '%CHROMt%POSt%INFO/ENDt[%GT]n' input_file.vcf
# Where:
#	- Fixed columns like CHROM and POS are referred to as %COLUMN
#	- Info fields need to be specified as %INFO/TAG
#	- Format fields need to be enclosed in brackets
#	- The tab t and new line n characters are used to format the output

Posted by: Guest on October-14-2020

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