python get list of files in path
from os import listdir
from os.path import isfile, join
onlyfiles = [f for f in listdir(mypath) if isfile(join(mypath, f))]
python get list of files in path
from os import listdir
from os.path import isfile, join
onlyfiles = [f for f in listdir(mypath) if isfile(join(mypath, f))]
pathlib change extension
from pathlib import Path
filename = "mysequence.fasta"
new_filename = Path(filename).stem + ".aln"
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