deseq2 output explained
Column Description
1 Gene Identifiers
2 mean normalised counts, averaged over all samples from both conditions
3 the logarithm (to basis 2) of the fold change (See the note in inputs section)
4 standard error estimate for the log2 fold change estimate
5 Wald statistic
6 p value for the statistical significance of this change
7 p value adjusted for multiple testing with the Benjamini-Hochberg procedure which controls false discovery rate (FDR)