from fasta to bed files
samtools faidx $fasta
awk 'BEGIN {FS="\t"}; {print $1 FS "0" FS $2}' $fasta.fai > $fasta.bed
from fasta to bed files
samtools faidx $fasta
awk 'BEGIN {FS="\t"}; {print $1 FS "0" FS $2}' $fasta.fai > $fasta.bed
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